Moke 
...Did you cut the plexi on your laser?... 

My laser (30W) cuts the plexi crystal clear.  The protective film when removed, takes any char marks with it, though its usually soot and can be wiped off... if not a quick buff will remove it... whenever my tape measure lies and the plexi finished up a tad bigger, a quick sand/scrape/rasp will fix it before a buff... if I succeed in cutting it too short, I usually have little alternative to re-cutting a new piece... preferably after I change dimensions... may seem a moot statement, but I've re-cut it many times before saving the changes.   

If your first cut is too short... Take the second cut from the longer end... LBD